Quicko adding unnecessary Health & Education cess

After filling everything, when I am reviewing details in quicko. It is adding 4,943 as Health & Education cess. Which would be normal if I had not paid for it.

But the TDS deducted from salary already has this tax paid as 4639. So instead of adding 4% to the rest of other income sources. I am being asked to pay again for the entire salary.

Why is quicko not check the uploaded form 16 that the major income of 12lakh for which this 4% is being considered is already paid by my company and can be verified in form 16 as well.